PrefScalingForm
0
0
311
446
Form

Store images in program memory as 16bit integers instead of converting to bytes
Load nonbyte data into program as 16bit integers

When setting the limits for scaling data with mean and standard deviation, load as 16bit integers to preserve dynamic range
Load data as 16bit when scaling by mean && SD

When scaling information is unavailable, load as 16bit integers to avoid scanning integer files and preserve dynamic range
Load data as 16bit when scaling is estimated

Set scaling limits from mean and SD, if they are available, instead of from min and max
Scale by mean && SD whenever it is available


When scaling by mean & SD, truncate at

Truncate as black or white beyond this # of SDs from the mean when scaling limits are set from mean and SD
2
30
6

SDs

Qt::Horizontal
40
20


When files must be scanned to find scaling
2
5
5

Read whole file to find min and max when scaling is unknown
Do full scan for true min and max

Scan 1 MB chunks at ~10 MB intervals to estimate min and max when scaling is unknown
Scan subset to estimate min and max

Scan 1 MB chunks at ~10 MB intervals to estimate the mean and SD when scaling is unknown
Scan subset to estimate mean and SD

Qt::Horizontal
40
20

After scanning to find scaling, insert min and max, or mean and SD, into MRC file header
Modify MRC file header with values from scan


Read EER file with superresolution

Set the amount of superresolution(1 for 2x, 2 for 4x) to retain when reading an EER file

Z binning

Set number of frames to sum when reading from EER file
1

Qt::Horizontal
40
20

When using montage piece coordinates from .mdoc
2
5
5

Use just the regular piece coordinates from the .mdoc file for a montage
Use nominal, regularly spaced coordinates

Use aligned coordinates from a montage's .mdoc file, preferably the ones with "very sloppy" off
Use aligned coordinates, non"very sloppy" first

Use aligned coordinates from a montage's .mdoc file, preferably the ones with "very sloppy" selected
Use aligned coordinates, "very sloppy" first



Autocontrast targets
4
5
2
5
5


Mean:
Qt::AlignRightQt::AlignTrailingQt::AlignVCenter
false

Mean intensity to display
5
250

SD:
Qt::AlignRightQt::AlignTrailingQt::AlignVCenter
false

Contrast range occupied by one Standard Deviation
5
100


Qt::Horizontal
QSizePolicy::Expanding
40
20

Set the target mean and SD so that they would generate the contrast currently seen
Set from Current Contrast

Qt::Horizontal
QSizePolicy::Expanding
40
20


Do autocontrast at start
false

Set contrast with "Auto" on first section shown

Never

If no model loaded

Always

Qt::Horizontal
40
20

Qt::Vertical
20
40