joinmodel(1) General Commands Manual joinmodel(1) NAME joinmodel - to join two models together SYNOPSIS joinmodel DESCRIPTION Joinmodel will combine two models, joining objects in the SECOND model to the ends of objects in the FIRST model, if the corresponding points match up sufficiently well. Branch points are allowed in either model, and should be preserved even during joining of objects. Point "marks" (numbers controlling point symbol display), which are properties of individual points in the model, will be preserved, but text labels in the second model will not. Objects will be joined together only if there is physical overlap between the end of the object in the FIRST model and the start of the object in the SECOND model. If an object in the FIRST model ends on one section and an object in the SECOND model starts in the same loca- tion on the next section, they will not be joined. When two objects are joined together, the points in the object in the SECOND model that overlap will be thrown away, and the rest of the points in that object will be added to the end of the object in the FIRST model. The resulting object will have the same color and other attributes as the original object in the FIRST model. All other objects will be carried over into the joined model without modifica- tion. Entries to the program: Name of SECOND model file (YES, it needs the SECOND one first). Name of FIRST model file Name of output model file Maximum distance in the X-Y plane, and maximum separation in Z, allowed in order for points from the two different models to be considered matching points. Enter / to accept the default values in brackets. Maximum overlap to look for between objects in the two models. Enter / to accept the default value in brackets. This parameter controls how long it takes the program to look for matches. The program considers the end point of each object in the FIRST model in turn. It looks for a match between that end point and the first, second, etc. point of each object in the SECOND model (up to the number specified by the maximum overlap parameter). When it finds a match, it then tests whether each of the points from the beginning of the object in the SECOND model up to that matching point also match the corre- sponding points in the object in the FIRST model. Only if there is a complete match along the entire stretch of overlap will the objects be joined. HISTORY Written by David Mastronarde, 1/10/90 BUGS Email bug reports to mast at colorado dot edu. IMOD 4.11.0 joinmodel(1)