gputilttest(1) General Commands Manual gputilttest(1)
NAME
gputilttest - Test reliability of GPU with repeated runs of Tilt pro-
gram
SYNOPSIS
gputilttest [-l] [-PID] [#_of_minutes] [GPU_#]
DESCRIPTION
gputilttest is a Python script to test the reliability of a GPU for
computations in IMOD by running Tilt repeatedly and comparing the
results on each run to the previous run. Any nonzero difference is
counted as a failure. The program alternates between 10 runs with no
local alignments and 10 runs with local alignments. Computational
reliability is much less of an issue than it was some years ago, but
this program is still useful for assessing whether the GPU is function-
ing for IMOD programs.
It is important to test a GPU before using it for generating tomograms.
The GPU should be tested again if it is moved to a new machine, if the
NVIDIA drivers are changed, or if there is a major upgrade to the oper-
ating system.
There are two optional arguments for general use that go at the end of
the command. The first argument can be used to set the number of min-
utes to run the test; the default is 1 minute, which is generally suf-
ficient to flush out problems. Fractional values may be entered. The
second argument is the GPU number, numbered from 1. The default is to
use the only GPU or the fastest GPU. Before these arguments (if they
are entered), there are also two options: -l to leave the log file even
when there is not a failure, and -PID to print the process ID (for
Etomo's use).
FILES
The program creates a number of files in the current directory, and
removes all of them when it exits, or when it is interrupted with Ctrl-
C. The log file for each run, gputest.log, is removed unless the run
fails or the -l option is entered.
IMOD 5.2.0 gputilttest(1)