5/29/25: Fixed a problem in the BatchRunTomo interface that mainly appears on a cluster. When running batchruntomo with processchunks, the steps were not displayed, and the resume button was not enabled after a kill or pause.
5/27/25: Fixed crash from unlinking first linked slicer.
5/24/25: Fixed Beadtrack handling of boxes near edge.
5/22/25: Fixed meshing crash when capping.
5/8/25: Fixed problems with pausing, resuming, and reconnecting to processes on a cluster.
5/3/25: Fixed Processchunks pausing on a cluster queue when no jobs are running yet.
4/30/25: Made it possible for 3dmod to read shared memory files created with Manageshrmem.
4/22/25: In Align Frames interface, switched the Rotation/flip fields to Basic mode.
4/12/25: In Final Aligned Stack, added informational text about the "Diameter to erase" field in the Erase Gold tab.
4/12/25: In Fine Alignment, fixed reloading beam tilt after running restrictalign.
4/12/25: Fixed message from Fine Alignment when prealigned stack is missing and allowed it to run without stack.
4/4/25: Fixed message from Fine Alignment when prealigned stack is missing and allowed it to run without stack.
4/3/25: Made Alignframes assume MRC frame stacks with no titles, grid size 1, and min/max 0 are from Thermo/FEI software and need inversion.
4/1/25: Fixed Batchruntomo putting bad option in ctfcorrection.com.
2/28/25: Fixed Tilt reprojecting a model to not put out garbage points for excluded views.
2/26/25: Fixed 3dmodbg, 3dmodv, processchunksbg missing on Windows.
2/2/25: Made changes to protect against the wrong diameter being used for bead erasing when doing 3D CTF correction with raw input.
1/19/25: Fixed "Just Reload" in 3dmod image reload dialog when there is only one image file.
1/22/25: Fixed 3dmod image processing window doing FFT by mistake after being opened with Shift F.
1/20/25: Fixed Restrictalign failing to turn off ProjectionStretch in com file (In 5.1).
1/14/25: Changed option to Ctfphaseflip to take unbinned pixel size, which is inserted by Copytomocoms and does not need to be managed.
1/8/25: Fixed Autofidseed to use the scalable sigma value used in cryo template for kernel filtering with the Sobel filter.
1/8/25: Added option to Ctfphaseflip to specify the binning of the input images so that it can adjust alignment shifts.
1/3/25: Fixed crash and model scaling problem when using the -add option to Imodfindbeads.