Content-type: text/html Manpage of plotRotAxes

plotRotAxes

Section: User Commands (1)
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NAME

plotRotAxes - create 3D quiver plot showing particle rotation axes  

SYNOPSIS

plotRotAxes inputModel rotAxes length
plotRotAxes inputModel rotAxes length lineWidth  

DESCRIPTION

Create a 3D quiver plot showing the particle location and rotation axis orientation for each particle in the input model. An arrow with the specified length and width will be drawn with its tail at the particle location. Zooming, rotation, and translation of the plot, in addition to identification and location of specific particles are available from tools in the figure menu.
inputModel
The path / filenmame of the IMOD model containing the particle locations. As in PEET alignment and averaging, only particles in object 1 will be considered.
rotAxes
The path / filename of the comma-seperated-value rotation axes file corresponding to the input model. The number of lines in this file must correspond to the number of parrticles in the input model, and each line must x,y,z values defining the corresponding rotation axis.
length
The length in pixels to use for each arrow.
lineWidth
The line width to use for each arrow. (Optional. Default = 0.5).
 

AUTHOR

John Heumann  

SEE ALSO

PEET(1), createAlignedModel(1), spikeInit(1), stalkInit(1)


 

Index

NAME
SYNOPSIS
DESCRIPTION
AUTHOR
SEE ALSO

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Time: 21:10:05 GMT, March 20, 2017