*** Entries to program processchunks *** g = 1 n = 18 d = 5 c = bpv.cmds P = 1 Non-option arguments: bigfoot,bigfoot,bigfoot,bigfoot,bear,bear,bear,bear,bear,bear,tubule,tubule,tubule,tubule,tubule,tubule,tubule,tubule,eclipse,eclipse,eclipse,eclipse,eclipse,eclipse,eclipse,eclipse,sanguine,sanguine bpv *** End of entries *** Shell PID: 21655 IMPORTANT: Ctrl-C does not work with this version of processchunks. Use or the -c option (-c defaults to processchunks.input). 0 OF 139 DONE SO FAR Running bpv-start.com on bigfoot ... bpv-start.com finished on bigfoot WARNING: User-supplied reference may be too small! Running bpv-001.com on bigfoot ... Running bpv-002.com on bigfoot ... Running bpv-003.com on bigfoot ... Running bpv-004.com on bigfoot ... Running bpv-005.com on bear ... Running bpv-006.com on bear ... Running bpv-007.com on bear ... Running bpv-008.com on bear ... Running bpv-009.com on bear ... Running bpv-010.com on bear ... Running bpv-011.com on tubule ... Running bpv-012.com on tubule ... Running bpv-013.com on tubule ... Running bpv-014.com on tubule ... Running bpv-015.com on tubule ... Running bpv-016.com on tubule ... Running bpv-017.com on tubule ... Running bpv-018.com on tubule ... Running bpv-019.com on eclipse ... Running bpv-020.com on eclipse ... Running bpv-021.com on eclipse ... Running bpv-022.com on eclipse ... Running bpv-023.com on eclipse ... Running bpv-024.com on eclipse ... Running bpv-025.com on eclipse ... Running bpv-026.com on eclipse ... Running bpv-027.com on sanguine ... Running bpv-028.com on sanguine ... 1 OF 139 DONE SO FAR bpv-002.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (3 times) Running bpv-029.com on bigfoot ... 2 OF 139 DONE SO FAR bpv-004.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) Running bpv-030.com on bigfoot ... 3 OF 139 DONE SO FAR bpv-001.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best phi was found at the end of the search range! (5 times) WARNING: Best theta was found at the end of the search range! Running bpv-031.com on bigfoot ... 4 OF 139 DONE SO FAR bpv-003.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (3 times) Running bpv-032.com on bigfoot ... 5 OF 139 DONE SO FAR bpv-027.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! (2 times) Running bpv-033.com on sanguine ... 6 OF 139 DONE SO FAR bpv-028.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (4 times) Running bpv-034.com on sanguine ... 7 OF 139 DONE SO FAR bpv-022.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) Running bpv-035.com on eclipse ... 8 OF 139 DONE SO FAR bpv-019.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! Running bpv-036.com on eclipse ... 9 OF 139 DONE SO FAR bpv-021.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! WARNING: Best phi was found at the end of the search range! Running bpv-037.com on eclipse ... 10 OF 139 DONE SO FAR bpv-011.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! WARNING: Best phi was found at the end of the search range! Running bpv-038.com on tubule ... 11 OF 139 DONE SO FAR bpv-017.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) Running bpv-039.com on tubule ... 12 OF 139 DONE SO FAR bpv-012.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best x was found at the end of the search range! Running bpv-040.com on tubule ... 13 OF 139 DONE SO FAR bpv-023.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) Running bpv-041.com on eclipse ... 14 OF 139 DONE SO FAR bpv-018.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best phi was found at the end of the search range! WARNING: Best theta was found at the end of the search range! Running bpv-042.com on tubule ... 15 OF 139 DONE SO FAR bpv-015.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (5 times) WARNING: Best phi was found at the end of the search range! (3 times) Running bpv-043.com on tubule ... 16 OF 139 DONE SO FAR bpv-016.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! Running bpv-044.com on tubule ... 17 OF 139 DONE SO FAR bpv-014.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best y was found at the end of the search range! Running bpv-045.com on tubule ... 18 OF 139 DONE SO FAR bpv-013.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (2 times) 19 OF 139 DONE SO FAR bpv-025.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! 20 OF 139 DONE SO FAR bpv-020.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! 21 OF 139 DONE SO FAR bpv-024.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! WARNING: Best x was found at the end of the search range! 22 OF 139 DONE SO FAR bpv-026.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! 23 OF 139 DONE SO FAR bpv-005.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! WARNING: Best phi was found at the end of the search range! WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! 24 OF 139 DONE SO FAR bpv-007.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! WARNING: Best phi was found at the end of the search range! bpv-008.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! bpv-009.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Best theta was found at the end of the search range! 27 OF 139 DONE SO FAR bpv-006.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (5 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! WARNING: Best x was found at the end of the search range! bpv-010.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! WARNING: Best theta was found at the end of the search range! 29 OF 139 DONE SO FAR bpv-029.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! 30 OF 139 DONE SO FAR bpv-030.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (6 times) WARNING: Best theta was found at the end of the search range! 31 OF 139 DONE SO FAR bpv-031.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! 32 OF 139 DONE SO FAR bpv-032.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! 33 OF 139 DONE SO FAR bpv-033.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best x was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (3 times) bpv-034.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! WARNING: Best theta was found at the end of the search range! 35 OF 139 DONE SO FAR bpv-035.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (2 times) 36 OF 139 DONE SO FAR bpv-036.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! (2 times) 37 OF 139 DONE SO FAR bpv-037.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (3 times) 38 OF 139 DONE SO FAR bpv-041.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best y was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! 39 OF 139 DONE SO FAR bpv-044.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) 40 OF 139 DONE SO FAR bpv-038.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (6 times) 41 OF 139 DONE SO FAR bpv-043.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (2 times) 42 OF 139 DONE SO FAR bpv-039.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (7 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! 43 OF 139 DONE SO FAR bpv-040.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (4 times) 44 OF 139 DONE SO FAR bpv-042.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (6 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best phi was found at the end of the search range! (2 times) 45 OF 139 DONE SO FAR bpv-045.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! 46 OF 139 DONE SO FAR Running bpv-046-sync.com on bigfoot ... bpv-046-sync.com finished on bigfoot Created LOGFILE: bpv_WarningsAndErrors.log Running bpv-047.com on bigfoot ... Running bpv-048.com on bigfoot ... Running bpv-049.com on bigfoot ... Running bpv-050.com on bigfoot ... Running bpv-051.com on bear ... Running bpv-052.com on bear ... Running bpv-053.com on bear ... Running bpv-054.com on bear ... Running bpv-055.com on bear ... Running bpv-056.com on bear ... Running bpv-057.com on tubule ... Running bpv-058.com on tubule ... Running bpv-059.com on tubule ... Running bpv-060.com on tubule ... Running bpv-061.com on tubule ... Running bpv-062.com on tubule ... Running bpv-063.com on tubule ... Running bpv-064.com on tubule ... Running bpv-065.com on eclipse ... Running bpv-066.com on eclipse ... Running bpv-067.com on eclipse ... Running bpv-068.com on eclipse ... Running bpv-069.com on eclipse ... Running bpv-070.com on eclipse ... Running bpv-071.com on eclipse ... Running bpv-072.com on eclipse ... Running bpv-073.com on sanguine ... Running bpv-074.com on sanguine ... 47 OF 139 DONE SO FAR bpv-047.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Skipping out of range angular search(es) at: (10 times) WARNING: Best phi was found at the end of the search range! WARNING: Best psi was found at the end of the search range! Running bpv-075.com on bigfoot ... 48 OF 139 DONE SO FAR bpv-049.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Z axis minimum index out of range by 7 voxels! Running bpv-076.com on bigfoot ... 49 OF 139 DONE SO FAR bpv-048.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Z axis minimum index out of range by 4 voxels! WARNING: Best z was found at the end of the search range! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Z axis minimum index out of range by 2 voxels! WARNING: Best psi was found at the end of the search range! Running bpv-077.com on bigfoot ... bpv-061.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (10 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Z axis minimum index out of range by 7 voxels! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! WARNING: Z axis minimum index out of range by 4 voxels! WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! (2 times) Running bpv-078.com on tubule ... 51 OF 139 DONE SO FAR bpv-060.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (10 times) WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! Running bpv-079.com on tubule ... 52 OF 139 DONE SO FAR bpv-069.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (9 times) WARNING: Ignoring one or more out of range shifts! (7 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Z axis minimum index out of range by 5 voxels! WARNING: Best theta was found at the end of the search range! Running bpv-080.com on eclipse ... 53 OF 139 DONE SO FAR bpv-072.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Skipping out of range angular search(es) at: (10 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 6 voxels! WARNING: X axis maximum index out of range by 3 voxels! WARNING: Best z was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 9 voxels! Running bpv-081.com on eclipse ... 54 OF 139 DONE SO FAR bpv-063.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Best phi was found at the end of the search range! (2 times) Running bpv-082.com on tubule ... 55 OF 139 DONE SO FAR bpv-058.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Best phi was found at the end of the search range! WARNING: Z axis minimum index out of range by 17 voxels! WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! Running bpv-083.com on tubule ... 56 OF 139 DONE SO FAR bpv-073.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (10 times) WARNING: Ignoring one or more out of range shifts! (9 times) WARNING: Best psi was found at the end of the search range! (7 times) WARNING: Best z was found at the end of the search range! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best x was found at the end of the search range! WARNING: Z axis maximum index out of range by 16 voxels! Running bpv-084.com on sanguine ... 57 OF 139 DONE SO FAR bpv-064.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Ignoring one or more out of range shifts! WARNING: Best theta was found at the end of the search range! (2 times) Running bpv-085.com on tubule ... 58 OF 139 DONE SO FAR bpv-059.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Best y was found at the end of the search range! Running bpv-086.com on tubule ... 59 OF 139 DONE SO FAR bpv-070.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 4 voxels! (2 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Z axis maximum index out of range by 7 voxels! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Z axis maximum index out of range by 2 voxels! Running bpv-087.com on eclipse ... 60 OF 139 DONE SO FAR bpv-053.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Ignoring one or more out of range shifts! (9 times) WARNING: Best phi was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Z axis minimum index out of range by 1 voxels! WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! Running bpv-088.com on bear ... 61 OF 139 DONE SO FAR bpv-066.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Best z was found at the end of the search range! Running bpv-089.com on eclipse ... 62 OF 139 DONE SO FAR bpv-067.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (7 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best z was found at the end of the search range! WARNING: Z axis minimum index out of range by 4 voxels! (2 times) WARNING: Z axis minimum index out of range by 2 voxels! WARNING: Z axis minimum index out of range by 5 voxels! WARNING: Best phi was found at the end of the search range! Running bpv-090.com on eclipse ... 63 OF 139 DONE SO FAR bpv-065.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Z axis minimum index out of range by 8 voxels! Running bpv-091.com on eclipse ... 64 OF 139 DONE SO FAR bpv-074.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best y was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 2 voxels! (2 times) 65 OF 139 DONE SO FAR bpv-052.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (10 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best psi was found at the end of the search range! (2 times) 66 OF 139 DONE SO FAR bpv-050.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! 67 OF 139 DONE SO FAR bpv-071.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 6 voxels! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! WARNING: Z axis maximum index out of range by 3 voxels! 68 OF 139 DONE SO FAR bpv-068.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (7 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Z axis minimum index out of range by 5 voxels! WARNING: Best psi was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Y axis maximum index out of range by 10 voxels! WARNING: Best x was found at the end of the search range! WARNING: Z axis minimum index out of range by 9 voxels! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Y axis maximum index out of range by 2 voxels! WARNING: Z axis minimum index out of range by 1 voxels! 69 OF 139 DONE SO FAR bpv-054.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis minimum index out of range by 11 voxels! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Ignoring one or more out of range shifts! (9 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! WARNING: Best y was found at the end of the search range! 70 OF 139 DONE SO FAR bpv-057.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! (2 times) 71 OF 139 DONE SO FAR bpv-062.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (7 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best phi was found at the end of the search range! (2 times) 72 OF 139 DONE SO FAR bpv-051.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (9 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: X axis maximum index out of range by 1 voxels! WARNING: Best y was found at the end of the search range! 73 OF 139 DONE SO FAR bpv-055.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis minimum index out of range by 5 voxels! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best phi was found at the end of the search range! (5 times) WARNING: Best x was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! 74 OF 139 DONE SO FAR bpv-076.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 3 voxels! WARNING: Best psi was found at the end of the search range! (5 times) WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 6 voxels! WARNING: Z axis maximum index out of range by 4 voxels! WARNING: Best x was found at the end of the search range! WARNING: Best y was found at the end of the search range! 75 OF 139 DONE SO FAR bpv-075.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 8 voxels! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best z was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! WARNING: Best phi was found at the end of the search range! WARNING: Best x was found at the end of the search range! 76 OF 139 DONE SO FAR bpv-084.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best phi was found at the end of the search range! (6 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Z axis maximum index out of range by 5 voxels! WARNING: Best z was found at the end of the search range! 77 OF 139 DONE SO FAR bpv-056.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! WARNING: Z axis minimum index out of range by 1 voxels! 78 OF 139 DONE SO FAR bpv-077.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best x was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 1 voxels! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 9 voxels! WARNING: Z axis maximum index out of range by 4 voxels! WARNING: Best psi was found at the end of the search range! 79 OF 139 DONE SO FAR bpv-080.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 5 voxels! (2 times) WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 4 voxels! WARNING: Z axis maximum index out of range by 11 voxels! WARNING: Best y was found at the end of the search range! bpv-087.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 1 voxels! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 18 voxels! WARNING: Z axis maximum index out of range by 4 voxels! (2 times) WARNING: Z axis maximum index out of range by 7 voxels! (2 times) 81 OF 139 DONE SO FAR bpv-081.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (10 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Z axis maximum index out of range by 2 voxels! (2 times) WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 16 voxels! WARNING: Best x was found at the end of the search range! 82 OF 139 DONE SO FAR bpv-088.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 10 voxels! WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Z axis maximum index out of range by 5 voxels! (2 times) 83 OF 139 DONE SO FAR bpv-089.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 6 voxels! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 2 voxels! WARNING: Z axis maximum index out of range by 5 voxels! WARNING: Z axis maximum index out of range by 7 voxels! 84 OF 139 DONE SO FAR bpv-090.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (8 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (5 times) WARNING: Z axis maximum index out of range by 3 voxels! (2 times) WARNING: Z axis maximum index out of range by 12 voxels! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 11 voxels! WARNING: Best y was found at the end of the search range! 85 OF 139 DONE SO FAR bpv-085.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best y was found at the end of the search range! WARNING: Z axis maximum index out of range by 7 voxels! WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 2 voxels! 86 OF 139 DONE SO FAR bpv-091.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 6 voxels! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 14 voxels! WARNING: Best phi was found at the end of the search range! (5 times) WARNING: Z axis maximum index out of range by 15 voxels! WARNING: Z axis maximum index out of range by 8 voxels! WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 4 voxels! 87 OF 139 DONE SO FAR bpv-086.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (7 times) WARNING: Best phi was found at the end of the search range! (6 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Z axis maximum index out of range by 15 voxels! WARNING: Z axis maximum index out of range by 5 voxels! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Z axis maximum index out of range by 6 voxels! 88 OF 139 DONE SO FAR bpv-079.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (6 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 1 voxels! WARNING: Z axis maximum index out of range by 9 voxels! WARNING: Z axis maximum index out of range by 7 voxels! 89 OF 139 DONE SO FAR bpv-083.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (6 times) WARNING: Z axis maximum index out of range by 4 voxels! (3 times) WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Best theta was found at the end of the search range! WARNING: Z axis maximum index out of range by 1 voxels! 90 OF 139 DONE SO FAR bpv-078.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (10 times) WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (7 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best z was found at the end of the search range! 91 OF 139 DONE SO FAR bpv-082.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best phi was found at the end of the search range! (6 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Z axis maximum index out of range by 13 voxels! WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Z axis maximum index out of range by 9 voxels! WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! 92 OF 139 DONE SO FAR Running bpv-092-sync.com on bigfoot ... bpv-092-sync.com finished on bigfoot Created LOGFILE: bpv_WarningsAndErrors.log Running bpv-093.com on bigfoot ... Running bpv-094.com on bigfoot ... Running bpv-095.com on bigfoot ... Running bpv-096.com on bigfoot ... Running bpv-097.com on bear ... Running bpv-098.com on bear ... Running bpv-099.com on bear ... Running bpv-100.com on bear ... Running bpv-101.com on bear ... Running bpv-102.com on bear ... Running bpv-103.com on tubule ... Running bpv-104.com on tubule ... Running bpv-105.com on tubule ... Running bpv-106.com on tubule ... Running bpv-107.com on tubule ... Running bpv-108.com on tubule ... Running bpv-109.com on tubule ... Running bpv-110.com on tubule ... Running bpv-111.com on eclipse ... Running bpv-112.com on eclipse ... Running bpv-113.com on eclipse ... Running bpv-114.com on eclipse ... Running bpv-115.com on eclipse ... Running bpv-116.com on eclipse ... Running bpv-117.com on eclipse ... Running bpv-118.com on eclipse ... Running bpv-119.com on sanguine ... Running bpv-120.com on sanguine ... 93 OF 139 DONE SO FAR bpv-093.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Best phi was found at the end of the search range! WARNING: Z axis minimum index out of range by 1 voxels! Running bpv-121.com on bigfoot ... 94 OF 139 DONE SO FAR bpv-094.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best y was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Best theta was found at the end of the search range! Running bpv-122.com on bigfoot ... 95 OF 139 DONE SO FAR bpv-095.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! WARNING: Z axis minimum index out of range by 8 voxels! WARNING: Best psi was found at the end of the search range! Running bpv-123.com on bigfoot ... 96 OF 139 DONE SO FAR bpv-096.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (2 times) WARNING: Skipping out of range angular search(es) at: (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (2 times) Running bpv-124.com on bigfoot ... 97 OF 139 DONE SO FAR bpv-099.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Z axis minimum index out of range by 12 voxels! WARNING: Best theta was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Best z was found at the end of the search range! Running bpv-125.com on bear ... 98 OF 139 DONE SO FAR bpv-118.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Z axis maximum index out of range by 6 voxels! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! (2 times) Running bpv-126.com on eclipse ... 99 OF 139 DONE SO FAR bpv-098.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Skipping out of range angular search(es) at: (7 times) Running bpv-127.com on bear ... bpv-111.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (6 times) Running bpv-128.com on eclipse ... bpv-112.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! WARNING: X axis maximum index out of range by 6 voxels! WARNING: Ignoring one or more out of range shifts! (2 times) Running bpv-129.com on eclipse ... bpv-114.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! (3 times) WARNING: Y axis maximum index out of range by 10 voxels! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Z axis minimum index out of range by 11 voxels! WARNING: Y axis maximum index out of range by 2 voxels! WARNING: Y axis maximum index out of range by 3 voxels! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Z axis minimum index out of range by 15 voxels! WARNING: Best y was found at the end of the search range! WARNING: Y axis maximum index out of range by 7 voxels! Running bpv-130.com on eclipse ... 103 OF 139 DONE SO FAR bpv-101.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis minimum index out of range by 20 voxels! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! WARNING: Best x was found at the end of the search range! Running bpv-131.com on bear ... bpv-113.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (4 times) WARNING: Z axis minimum index out of range by 15 voxels! WARNING: X axis maximum index out of range by 10 voxels! WARNING: Z axis minimum index out of range by 2 voxels! WARNING: Ignoring one or more out of range shifts! WARNING: Best phi was found at the end of the search range! WARNING: Best psi was found at the end of the search range! Running bpv-132.com on eclipse ... bpv-116.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Best phi was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Z axis maximum index out of range by 8 voxels! WARNING: Best theta was found at the end of the search range! Running bpv-133.com on eclipse ... 106 OF 139 DONE SO FAR bpv-106.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! WARNING: Best psi was found at the end of the search range! (2 times) Running bpv-134.com on tubule ... 107 OF 139 DONE SO FAR bpv-100.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis minimum index out of range by 1 voxels! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best phi was found at the end of the search range! WARNING: Best z was found at the end of the search range! Running bpv-135.com on bear ... 108 OF 139 DONE SO FAR bpv-117.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 8 voxels! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Z axis maximum index out of range by 5 voxels! WARNING: Z axis maximum index out of range by 13 voxels! Running bpv-136.com on eclipse ... 109 OF 139 DONE SO FAR bpv-119.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Skipping out of range angular search(es) at: (4 times) WARNING: Z axis maximum index out of range by 12 voxels! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 10 voxels! WARNING: Z axis maximum index out of range by 13 voxels! Running bpv-137.com on sanguine ... 110 OF 139 DONE SO FAR bpv-104.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Ignoring one or more out of range shifts! WARNING: X axis maximum index out of range by 4 voxels! WARNING: Z axis minimum index out of range by 7 voxels! WARNING: Best phi was found at the end of the search range! 111 OF 139 DONE SO FAR bpv-097.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: X axis maximum index out of range by 4 voxels! bpv-105.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best psi was found at the end of the search range! WARNING: Ignoring one or more out of range shifts! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (2 times) bpv-107.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Z axis minimum index out of range by 9 voxels! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Z axis minimum index out of range by 7 voxels! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best x was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! WARNING: Best z was found at the end of the search range! bpv-120.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (6 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Skipping out of range angular search(es) at: (3 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: Best z was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 10 voxels! 115 OF 139 DONE SO FAR bpv-109.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! WARNING: Best x was found at the end of the search range! WARNING: X axis maximum index out of range by 4 voxels! WARNING: Best phi was found at the end of the search range! 116 OF 139 DONE SO FAR bpv-115.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (4 times) WARNING: Ignoring one or more out of range shifts! (7 times) WARNING: Z axis minimum index out of range by 5 voxels! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (3 times) 117 OF 139 DONE SO FAR bpv-110.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Z axis minimum index out of range by 3 voxels! WARNING: Ignoring one or more out of range shifts! WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! 118 OF 139 DONE SO FAR bpv-102.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (4 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Best theta was found at the end of the search range! 119 OF 139 DONE SO FAR bpv-103.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! 120 OF 139 DONE SO FAR bpv-108.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Skipping out of range angular search(es) at: (4 times) WARNING: Ignoring one or more out of range shifts! WARNING: Best x was found at the end of the search range! WARNING: Best psi was found at the end of the search range! WARNING: Best y was found at the end of the search range! 121 OF 139 DONE SO FAR bpv-121.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! 122 OF 139 DONE SO FAR bpv-122.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 15 voxels! WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 12 voxels! WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! 123 OF 139 DONE SO FAR bpv-123.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 8 voxels! WARNING: Z axis maximum index out of range by 10 voxels! WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best y was found at the end of the search range! 124 OF 139 DONE SO FAR bpv-124.com finished on bigfoot WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Skipping out of range angular search(es) at: (3 times) WARNING: Best phi was found at the end of the search range! (5 times) WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best y was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (2 times) 125 OF 139 DONE SO FAR bpv-134.com finished on tubule WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 10 voxels! WARNING: Ignoring one or more out of range shifts! (4 times) WARNING: Skipping out of range angular search(es) at: (7 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! 126 OF 139 DONE SO FAR bpv-131.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! WARNING: Skipping out of range angular search(es) at: (8 times) WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Best psi was found at the end of the search range! (5 times) WARNING: Best y was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 13 voxels! WARNING: Z axis maximum index out of range by 9 voxels! WARNING: Z axis maximum index out of range by 11 voxels! WARNING: Best x was found at the end of the search range! (4 times) WARNING: Best z was found at the end of the search range! (3 times) bpv-130.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (9 times) WARNING: Best theta was found at the end of the search range! (5 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! (4 times) WARNING: Ignoring one or more out of range shifts! WARNING: Best phi was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Best z was found at the end of the search range! 128 OF 139 DONE SO FAR bpv-133.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! (4 times) WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 16 voxels! WARNING: Best theta was found at the end of the search range! WARNING: X axis maximum index out of range by 9 voxels! WARNING: Z axis maximum index out of range by 10 voxels! WARNING: Z axis maximum index out of range by 19 voxels! WARNING: Z axis maximum index out of range by 4 voxels! WARNING: Z axis maximum index out of range by 1 voxels! WARNING: Z axis maximum index out of range by 11 voxels! WARNING: Best phi was found at the end of the search range! 129 OF 139 DONE SO FAR bpv-136.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (6 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 7 voxels! WARNING: Best phi was found at the end of the search range! WARNING: Ignoring one or more out of range shifts! 130 OF 139 DONE SO FAR bpv-129.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Best phi was found at the end of the search range! WARNING: Best theta was found at the end of the search range! (4 times) WARNING: Best x was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! (2 times) WARNING: Best z was found at the end of the search range! (4 times) WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Best psi was found at the end of the search range! WARNING: Z axis maximum index out of range by 6 voxels! WARNING: Z axis maximum index out of range by 16 voxels! WARNING: Z axis maximum index out of range by 14 voxels! 131 OF 139 DONE SO FAR bpv-132.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 16 voxels! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Z axis maximum index out of range by 6 voxels! 132 OF 139 DONE SO FAR bpv-127.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (2 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! (3 times) WARNING: Ignoring one or more out of range shifts! (3 times) WARNING: Z axis maximum index out of range by 13 voxels! WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 3 voxels! WARNING: Z axis maximum index out of range by 16 voxels! 133 OF 139 DONE SO FAR bpv-125.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Skipping out of range angular search(es) at: (4 times) WARNING: Ignoring one or more out of range shifts! (2 times) WARNING: Z axis maximum index out of range by 7 voxels! WARNING: Best psi was found at the end of the search range! WARNING: Best phi was found at the end of the search range! WARNING: Best theta was found at the end of the search range! WARNING: Best y was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: X axis maximum index out of range by 5 voxels! WARNING: Z axis maximum index out of range by 3 voxels! 134 OF 139 DONE SO FAR bpv-126.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (6 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best y was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 8 voxels! WARNING: Skipping out of range angular search(es) at: (2 times) WARNING: Z axis maximum index out of range by 12 voxels! WARNING: Best z was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 7 voxels! WARNING: Best x was found at the end of the search range! WARNING: Z axis maximum index out of range by 4 voxels! 135 OF 139 DONE SO FAR bpv-128.com finished on eclipse WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Ignoring one or more out of range shifts! (5 times) WARNING: Best phi was found at the end of the search range! (3 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (4 times) WARNING: Best z was found at the end of the search range! (4 times) WARNING: Z axis maximum index out of range by 6 voxels! WARNING: Skipping out of range angular search(es) at: (5 times) WARNING: Z axis maximum index out of range by 23 voxels! WARNING: Best y was found at the end of the search range! (2 times) 136 OF 139 DONE SO FAR bpv-137.com finished on sanguine WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Z axis maximum index out of range by 17 voxels! (2 times) WARNING: Skipping out of range angular search(es) at: (2 times) WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best z was found at the end of the search range! (2 times) WARNING: Z axis maximum index out of range by 14 voxels! WARNING: Best phi was found at the end of the search range! (4 times) WARNING: Best psi was found at the end of the search range! (3 times) WARNING: Z axis maximum index out of range by 20 voxels! WARNING: Ignoring one or more out of range shifts! (2 times) WARNING: Best x was found at the end of the search range! (2 times) WARNING: Best y was found at the end of the search range! WARNING: X axis maximum index out of range by 4 voxels! WARNING: Z axis maximum index out of range by 15 voxels! 137 OF 139 DONE SO FAR bpv-135.com finished on bear WARNING: ../firstSearch//unMaskedbpv_Ref5_WGT.mrc not found. Disabling missing wedge compensation! WARNING: Best theta was found at the end of the search range! (3 times) WARNING: Best psi was found at the end of the search range! (2 times) WARNING: Skipping out of range angular search(es) at: (3 times) WARNING: Best phi was found at the end of the search range! (2 times) WARNING: Best x was found at the end of the search range! WARNING: Best z was found at the end of the search range! WARNING: Z axis maximum index out of range by 15 voxels! WARNING: Z axis maximum index out of range by 18 voxels! WARNING: Ignoring one or more out of range shifts! 138 OF 139 DONE SO FAR ALL DONE - going to run bpv-finish.com to reassemble Running bpv-finish.com on bigfoot ... bpv-finish.com finished on bigfoot Created LOGFILE: bpv_WarningsAndErrors.log WARNING: More particles were requested than are available! WARNING: Too many particles requested... using all available! WARNING: X axis maximum index out of range by 2 voxels! WARNING: X axis maximum index out of range by 1 voxels! WARNING: Z axis minimum index out of range by 2 voxels! (3 times) WARNING: Z axis minimum index out of range by 1 voxels! (7 times) WARNING: Z axis minimum index out of range by 4 voxels! (7 times) WARNING: Z axis minimum index out of range by 3 voxels! (8 times) WARNING: Z axis minimum index out of range by 7 voxels! (3 times) WARNING: Z axis minimum index out of range by 9 voxels! (2 times) WARNING: Z axis minimum index out of range by 6 voxels! (3 times) WARNING: Z axis minimum index out of range by 10 voxels! (5 times) WARNING: Z axis minimum index out of range by 8 voxels! (2 times) WARNING: Y axis maximum index out of range by 17 voxels! WARNING: Z axis minimum index out of range by 14 voxels! (3 times) WARNING: Y axis maximum index out of range by 12 voxels! WARNING: Y axis maximum index out of range by 7 voxels! WARNING: Z axis minimum index out of range by 21 voxels! (3 times) WARNING: Z axis maximum index out of range by 8 voxels! (5 times) WARNING: Z axis maximum index out of range by 1 voxels! (4 times) WARNING: X axis maximum index out of range by 13 voxels! WARNING: X axis maximum index out of range by 4 voxels! WARNING: Z axis minimum index out of range by 17 voxels! (2 times) WARNING: X axis maximum index out of range by 18 voxels! WARNING: Z axis minimum index out of range by 15 voxels! WARNING: X axis maximum index out of range by 8 voxels! WARNING: Z axis minimum index out of range by 16 voxels! WARNING: X axis maximum index out of range by 26 voxels! (2 times) WARNING: Z axis minimum index out of range by 13 voxels! WARNING: Y axis maximum index out of range by 26 voxels! WARNING: Y axis maximum index out of range by 1 voxels! (2 times) WARNING: Z axis minimum index out of range by 19 voxels! (2 times) WARNING: Y axis maximum index out of range by 19 voxels! WARNING: Z axis maximum index out of range by 19 voxels! (2 times) WARNING: Z axis maximum index out of range by 13 voxels! (3 times) WARNING: Z axis maximum index out of range by 25 voxels! (3 times) WARNING: Z axis maximum index out of range by 12 voxels! (2 times) WARNING: Z axis maximum index out of range by 35 voxels! (3 times) WARNING: Z axis maximum index out of range by 16 voxels! (4 times) WARNING: Z axis maximum index out of range by 21 voxels! (6 times) WARNING: X axis maximum index out of range by 7 voxels! WARNING: Z axis maximum index out of range by 18 voxels! (3 times) WARNING: Z axis maximum index out of range by 29 voxels! (4 times) WARNING: Z axis maximum index out of range by 32 voxels! (2 times) WARNING: Z axis maximum index out of range by 5 voxels! (2 times) WARNING: Z axis maximum index out of range by 17 voxels! (2 times) WARNING: Z axis maximum index out of range by 28 voxels! WARNING: X axis maximum index out of range by 14 voxels! WARNING: Z axis maximum index out of range by 15 voxels! (8 times) WARNING: Z axis maximum index out of range by 22 voxels! (4 times) WARNING: Y axis maximum index out of range by 15 voxels! WARNING: Y axis maximum index out of range by 11 voxels! WARNING: Z axis maximum index out of range by 20 voxels! WARNING: Z axis minimum index out of range by 24 voxels! WARNING: Z axis minimum index out of range by 12 voxels! (4 times) WARNING: Z axis minimum index out of range by 11 voxels! WARNING: Z axis minimum index out of range by 26 voxels! WARNING: Z axis maximum index out of range by 11 voxels! (3 times) WARNING: Z axis maximum index out of range by 14 voxels! (3 times) WARNING: Z axis maximum index out of range by 24 voxels! (3 times) WARNING: Z axis maximum index out of range by 9 voxels! (4 times) WARNING: Z axis maximum index out of range by 3 voxels! (4 times) WARNING: Z axis maximum index out of range by 33 voxels! (2 times) WARNING: Z axis maximum index out of range by 26 voxels! WARNING: X axis maximum index out of range by 23 voxels! WARNING: Z axis maximum index out of range by 23 voxels! (2 times) WARNING: Z axis maximum index out of range by 27 voxels! WARNING: Z axis maximum index out of range by 36 voxels! WARNING: Z axis maximum index out of range by 6 voxels! (4 times) WARNING: Y axis maximum index out of range by 4 voxels! WARNING: Z axis maximum index out of range by 31 voxels! (2 times) WARNING: Z axis minimum index out of range by 32 voxels! WARNING: X axis maximum index out of range by 24 voxels! WARNING: Z axis minimum index out of range by 28 voxels! WARNING: Z axis minimum index out of range by 23 voxels! WARNING: Y axis maximum index out of range by 27 voxels! WARNING: Y axis maximum index out of range by 9 voxels! WARNING: X axis maximum index out of range by 11 voxels! WARNING: Z axis maximum index out of range by 4 voxels! WARNING: Z axis maximum index out of range by 2 voxels! WARNING: Z axis maximum index out of range by 7 voxels! 139 OF 139 DONE SO FAR ALL DONE - nothing to reassemble Finished reassembling exitCode:0