THIS FILE IS JUST THE LOG FOR ONE CHUNK AND WAS COPIED BY PROCESSCHUNKS FROM ctfcorrection-001.log *** Entries to program ctfphaseflip *** InputStack = MTEg5series6D.ali OutputFileName = MTEg5series6D_ctfcorr.ali AngleFile = MTEg5series6D.tlt DefocusFile = MTEg5series6D.defocus DefocusTol = 200 InterpolationWidth = 20 PixelSize = 0.592 Voltage = 200 SphericalAberration = 2.0 AmplitudeContrast = 0.07 StartingEndingViews = 1 3 TotalViews = 1 61 BoundaryInfoFile = ctfcorrection-bound.info *** End of entries *** stackFn = MTEg5series6D.ali, angleFn=MTEg5series6D.tlt, invertAngles=0 volt=200 Kv, interpolationWidth=20 pixels, defocusTol=200 nm pixelSize=0.592000 nm, cs=2.000000 mm, ampContrast=0.070000 defocus[0] = 4.946000 microns defocus[1] = 4.946000 microns defocus[2] = 4.946000 microns defocus[3] = 4.914800 microns defocus[4] = 4.883600 microns defocus[5] = 4.852400 microns defocus[6] = 4.821200 microns defocus[7] = 4.790000 microns defocus[8] = 4.841200 microns defocus[9] = 4.892400 microns defocus[10] = 4.943600 microns defocus[11] = 4.994800 microns defocus[12] = 5.046000 microns defocus[13] = 5.101000 microns defocus[14] = 5.156000 microns defocus[15] = 5.211000 microns defocus[16] = 5.266000 microns defocus[17] = 5.321000 microns defocus[18] = 5.376000 microns defocus[19] = 5.323000 microns defocus[20] = 5.270000 microns defocus[21] = 5.217000 microns defocus[22] = 5.164000 microns defocus[23] = 5.111000 microns defocus[24] = 5.124400 microns defocus[25] = 5.137800 microns defocus[26] = 5.151200 microns defocus[27] = 5.164600 microns defocus[28] = 5.178000 microns defocus[29] = 5.183200 microns defocus[30] = 5.188400 microns defocus[31] = 5.193600 microns defocus[32] = 5.198800 microns defocus[33] = 5.204000 microns defocus[34] = 5.235000 microns defocus[35] = 5.266000 microns defocus[36] = 5.297000 microns defocus[37] = 5.328000 microns defocus[38] = 5.359000 microns defocus[39] = 5.381400 microns defocus[40] = 5.403800 microns defocus[41] = 5.426200 microns defocus[42] = 5.448600 microns defocus[43] = 5.471000 microns defocus[44] = 5.501000 microns defocus[45] = 5.531000 microns defocus[46] = 5.561000 microns defocus[47] = 5.591000 microns defocus[48] = 5.621000 microns defocus[49] = 5.606600 microns defocus[50] = 5.592200 microns defocus[51] = 5.577800 microns defocus[52] = 5.563400 microns defocus[53] = 5.549000 microns defocus[54] = 5.563000 microns defocus[55] = 5.577000 microns defocus[56] = 5.591000 microns defocus[57] = 5.605000 microns defocus[58] = 5.619000 microns defocus[59] = 5.619000 microns defocus[60] = 5.619000 microns Slice 1, tilt angle is 60.980000 degrees. Slice 1 of stack MTEg5series6D.ali is included stripPixelNum=190 interPixelNum=20 Slice 2, tilt angle is 58.900002 degrees. Slice 2 of stack MTEg5series6D.ali is included stripPixelNum=204 interPixelNum=20 Slice 3, tilt angle is 56.910000 degrees. Slice 3 of stack MTEg5series6D.ali is included stripPixelNum=220 interPixelNum=20 min, max, mean, # pixels= 173.139252 971.085327 507.606791 37748736 SUCCESSFULLY COMPLETED CHUNK DONE